Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Molecular mapping of the RNA Cap 2'-O-methyltransferase activation interface between severe acute respiratory syndrome coronavirus nsp10 and nsp16.

Identifieur interne : 000216 ( France/Analysis ); précédent : 000215; suivant : 000217

Molecular mapping of the RNA Cap 2'-O-methyltransferase activation interface between severe acute respiratory syndrome coronavirus nsp10 and nsp16.

Auteurs : Adrien Lugari [France] ; Stephane Betzi ; Etienne Decroly ; Emmanuel Bonnaud ; Aurélie Hermant ; Jean-Claude Guillemot ; Claire Debarnot ; Jean-Paul Borg ; Mickaël Bouvet ; Bruno Canard ; Xavier Morelli ; Patrick Lécine

Source :

RBID : pubmed:20699222

Descripteurs français

English descriptors

Abstract

Several protein-protein interactions within the SARS-CoV proteome have been identified, one of them being between non-structural proteins nsp10 and nsp16. In this work, we have mapped key residues on the nsp10 surface involved in this interaction. Alanine-scanning mutagenesis, bioinformatics, and molecular modeling were used to identify several "hot spots," such as Val(42), Met(44), Ala(71), Lys(93), Gly(94), and Tyr(96), forming a continuous protein-protein surface of about 830 Å(2), bearing very conserved amino acids among coronaviruses. Because nsp16 carries RNA cap 2'-O-methyltransferase (2'O-MTase) activity only in the presence of its interacting partner nsp10 (Bouvet, M., Debarnot, C., Imbert, I., Selisko, B., Snijder, E. J., Canard, B., and Decroly, E. (2010) PLoS Pathog. 6, e1000863), functional consequences of mutations on this surface were evaluated biochemically. Most changes that disrupted the nsp10-nsp16 interaction without structural perturbations were shown to abrogate stimulation of nsp16 RNA cap 2'O-MTase activity. More strikingly, the Y96A mutation abrogates stimulation of nsp16 2'O-MTase activity, whereas Y96F overstimulates it. Thus, the nsp10-nsp16 interface may represent an attractive target for antivirals against human and animal pathogenic coronaviruses.

DOI: 10.1074/jbc.M110.120014
PubMed: 20699222


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:20699222

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Molecular mapping of the RNA Cap 2'-O-methyltransferase activation interface between severe acute respiratory syndrome coronavirus nsp10 and nsp16.</title>
<author>
<name sortKey="Lugari, Adrien" sort="Lugari, Adrien" uniqKey="Lugari A" first="Adrien" last="Lugari">Adrien Lugari</name>
<affiliation wicri:level="3">
<nlm:affiliation>IMR Laboratory, UPR 3243, Institut de Microbiologie de la Méditérannée, CNRS and Aix-Marseille Universités, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>IMR Laboratory, UPR 3243, Institut de Microbiologie de la Méditérannée, CNRS and Aix-Marseille Universités, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Betzi, Stephane" sort="Betzi, Stephane" uniqKey="Betzi S" first="Stephane" last="Betzi">Stephane Betzi</name>
</author>
<author>
<name sortKey="Decroly, Etienne" sort="Decroly, Etienne" uniqKey="Decroly E" first="Etienne" last="Decroly">Etienne Decroly</name>
</author>
<author>
<name sortKey="Bonnaud, Emmanuel" sort="Bonnaud, Emmanuel" uniqKey="Bonnaud E" first="Emmanuel" last="Bonnaud">Emmanuel Bonnaud</name>
</author>
<author>
<name sortKey="Hermant, Aurelie" sort="Hermant, Aurelie" uniqKey="Hermant A" first="Aurélie" last="Hermant">Aurélie Hermant</name>
</author>
<author>
<name sortKey="Guillemot, Jean Claude" sort="Guillemot, Jean Claude" uniqKey="Guillemot J" first="Jean-Claude" last="Guillemot">Jean-Claude Guillemot</name>
</author>
<author>
<name sortKey="Debarnot, Claire" sort="Debarnot, Claire" uniqKey="Debarnot C" first="Claire" last="Debarnot">Claire Debarnot</name>
</author>
<author>
<name sortKey="Borg, Jean Paul" sort="Borg, Jean Paul" uniqKey="Borg J" first="Jean-Paul" last="Borg">Jean-Paul Borg</name>
</author>
<author>
<name sortKey="Bouvet, Mickael" sort="Bouvet, Mickael" uniqKey="Bouvet M" first="Mickaël" last="Bouvet">Mickaël Bouvet</name>
</author>
<author>
<name sortKey="Canard, Bruno" sort="Canard, Bruno" uniqKey="Canard B" first="Bruno" last="Canard">Bruno Canard</name>
</author>
<author>
<name sortKey="Morelli, Xavier" sort="Morelli, Xavier" uniqKey="Morelli X" first="Xavier" last="Morelli">Xavier Morelli</name>
</author>
<author>
<name sortKey="Lecine, Patrick" sort="Lecine, Patrick" uniqKey="Lecine P" first="Patrick" last="Lécine">Patrick Lécine</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2010">2010</date>
<idno type="RBID">pubmed:20699222</idno>
<idno type="pmid">20699222</idno>
<idno type="doi">10.1074/jbc.M110.120014</idno>
<idno type="wicri:Area/PubMed/Corpus">001651</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001651</idno>
<idno type="wicri:Area/PubMed/Curation">001651</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001651</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001631</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001631</idno>
<idno type="wicri:Area/Ncbi/Merge">002187</idno>
<idno type="wicri:Area/Ncbi/Curation">002187</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">002187</idno>
<idno type="wicri:Area/Main/Merge">002530</idno>
<idno type="wicri:Area/Main/Curation">002497</idno>
<idno type="wicri:Area/Main/Exploration">002497</idno>
<idno type="wicri:Area/France/Extraction">000216</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Molecular mapping of the RNA Cap 2'-O-methyltransferase activation interface between severe acute respiratory syndrome coronavirus nsp10 and nsp16.</title>
<author>
<name sortKey="Lugari, Adrien" sort="Lugari, Adrien" uniqKey="Lugari A" first="Adrien" last="Lugari">Adrien Lugari</name>
<affiliation wicri:level="3">
<nlm:affiliation>IMR Laboratory, UPR 3243, Institut de Microbiologie de la Méditérannée, CNRS and Aix-Marseille Universités, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>IMR Laboratory, UPR 3243, Institut de Microbiologie de la Méditérannée, CNRS and Aix-Marseille Universités, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Marseille</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Betzi, Stephane" sort="Betzi, Stephane" uniqKey="Betzi S" first="Stephane" last="Betzi">Stephane Betzi</name>
</author>
<author>
<name sortKey="Decroly, Etienne" sort="Decroly, Etienne" uniqKey="Decroly E" first="Etienne" last="Decroly">Etienne Decroly</name>
</author>
<author>
<name sortKey="Bonnaud, Emmanuel" sort="Bonnaud, Emmanuel" uniqKey="Bonnaud E" first="Emmanuel" last="Bonnaud">Emmanuel Bonnaud</name>
</author>
<author>
<name sortKey="Hermant, Aurelie" sort="Hermant, Aurelie" uniqKey="Hermant A" first="Aurélie" last="Hermant">Aurélie Hermant</name>
</author>
<author>
<name sortKey="Guillemot, Jean Claude" sort="Guillemot, Jean Claude" uniqKey="Guillemot J" first="Jean-Claude" last="Guillemot">Jean-Claude Guillemot</name>
</author>
<author>
<name sortKey="Debarnot, Claire" sort="Debarnot, Claire" uniqKey="Debarnot C" first="Claire" last="Debarnot">Claire Debarnot</name>
</author>
<author>
<name sortKey="Borg, Jean Paul" sort="Borg, Jean Paul" uniqKey="Borg J" first="Jean-Paul" last="Borg">Jean-Paul Borg</name>
</author>
<author>
<name sortKey="Bouvet, Mickael" sort="Bouvet, Mickael" uniqKey="Bouvet M" first="Mickaël" last="Bouvet">Mickaël Bouvet</name>
</author>
<author>
<name sortKey="Canard, Bruno" sort="Canard, Bruno" uniqKey="Canard B" first="Bruno" last="Canard">Bruno Canard</name>
</author>
<author>
<name sortKey="Morelli, Xavier" sort="Morelli, Xavier" uniqKey="Morelli X" first="Xavier" last="Morelli">Xavier Morelli</name>
</author>
<author>
<name sortKey="Lecine, Patrick" sort="Lecine, Patrick" uniqKey="Lecine P" first="Patrick" last="Lécine">Patrick Lécine</name>
</author>
</analytic>
<series>
<title level="j">The Journal of biological chemistry</title>
<idno type="eISSN">1083-351X</idno>
<imprint>
<date when="2010" type="published">2010</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Cell Line</term>
<term>Enzyme Activation</term>
<term>Humans</term>
<term>Methyltransferases (genetics)</term>
<term>Methyltransferases (metabolism)</term>
<term>Mutagenesis</term>
<term>Mutation, Missense</term>
<term>SARS Virus (genetics)</term>
<term>SARS Virus (metabolism)</term>
<term>Viral Nonstructural Proteins (genetics)</term>
<term>Viral Nonstructural Proteins (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Activation enzymatique</term>
<term>Humains</term>
<term>Lignée cellulaire</term>
<term>Methyltransferases (génétique)</term>
<term>Methyltransferases (métabolisme)</term>
<term>Mutagenèse</term>
<term>Mutation faux-sens</term>
<term>Protéines virales non structurales (génétique)</term>
<term>Protéines virales non structurales (métabolisme)</term>
<term>Virus du SRAS (génétique)</term>
<term>Virus du SRAS (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>Methyltransferases</term>
<term>Viral Nonstructural Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>Methyltransferases</term>
<term>Viral Nonstructural Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Methyltransferases</term>
<term>Protéines virales non structurales</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en">
<term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Methyltransferases</term>
<term>Protéines virales non structurales</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Cell Line</term>
<term>Enzyme Activation</term>
<term>Humans</term>
<term>Mutagenesis</term>
<term>Mutation, Missense</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Activation enzymatique</term>
<term>Humains</term>
<term>Lignée cellulaire</term>
<term>Mutagenèse</term>
<term>Mutation faux-sens</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Several protein-protein interactions within the SARS-CoV proteome have been identified, one of them being between non-structural proteins nsp10 and nsp16. In this work, we have mapped key residues on the nsp10 surface involved in this interaction. Alanine-scanning mutagenesis, bioinformatics, and molecular modeling were used to identify several "hot spots," such as Val(42), Met(44), Ala(71), Lys(93), Gly(94), and Tyr(96), forming a continuous protein-protein surface of about 830 Å(2), bearing very conserved amino acids among coronaviruses. Because nsp16 carries RNA cap 2'-O-methyltransferase (2'O-MTase) activity only in the presence of its interacting partner nsp10 (Bouvet, M., Debarnot, C., Imbert, I., Selisko, B., Snijder, E. J., Canard, B., and Decroly, E. (2010) PLoS Pathog. 6, e1000863), functional consequences of mutations on this surface were evaluated biochemically. Most changes that disrupted the nsp10-nsp16 interaction without structural perturbations were shown to abrogate stimulation of nsp16 RNA cap 2'O-MTase activity. More strikingly, the Y96A mutation abrogates stimulation of nsp16 2'O-MTase activity, whereas Y96F overstimulates it. Thus, the nsp10-nsp16 interface may represent an attractive target for antivirals against human and animal pathogenic coronaviruses.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
<region>
<li>Provence-Alpes-Côte d'Azur</li>
</region>
<settlement>
<li>Marseille</li>
</settlement>
</list>
<tree>
<noCountry>
<name sortKey="Betzi, Stephane" sort="Betzi, Stephane" uniqKey="Betzi S" first="Stephane" last="Betzi">Stephane Betzi</name>
<name sortKey="Bonnaud, Emmanuel" sort="Bonnaud, Emmanuel" uniqKey="Bonnaud E" first="Emmanuel" last="Bonnaud">Emmanuel Bonnaud</name>
<name sortKey="Borg, Jean Paul" sort="Borg, Jean Paul" uniqKey="Borg J" first="Jean-Paul" last="Borg">Jean-Paul Borg</name>
<name sortKey="Bouvet, Mickael" sort="Bouvet, Mickael" uniqKey="Bouvet M" first="Mickaël" last="Bouvet">Mickaël Bouvet</name>
<name sortKey="Canard, Bruno" sort="Canard, Bruno" uniqKey="Canard B" first="Bruno" last="Canard">Bruno Canard</name>
<name sortKey="Debarnot, Claire" sort="Debarnot, Claire" uniqKey="Debarnot C" first="Claire" last="Debarnot">Claire Debarnot</name>
<name sortKey="Decroly, Etienne" sort="Decroly, Etienne" uniqKey="Decroly E" first="Etienne" last="Decroly">Etienne Decroly</name>
<name sortKey="Guillemot, Jean Claude" sort="Guillemot, Jean Claude" uniqKey="Guillemot J" first="Jean-Claude" last="Guillemot">Jean-Claude Guillemot</name>
<name sortKey="Hermant, Aurelie" sort="Hermant, Aurelie" uniqKey="Hermant A" first="Aurélie" last="Hermant">Aurélie Hermant</name>
<name sortKey="Lecine, Patrick" sort="Lecine, Patrick" uniqKey="Lecine P" first="Patrick" last="Lécine">Patrick Lécine</name>
<name sortKey="Morelli, Xavier" sort="Morelli, Xavier" uniqKey="Morelli X" first="Xavier" last="Morelli">Xavier Morelli</name>
</noCountry>
<country name="France">
<region name="Provence-Alpes-Côte d'Azur">
<name sortKey="Lugari, Adrien" sort="Lugari, Adrien" uniqKey="Lugari A" first="Adrien" last="Lugari">Adrien Lugari</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000216 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000216 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     pubmed:20699222
   |texte=   Molecular mapping of the RNA Cap 2'-O-methyltransferase activation interface between severe acute respiratory syndrome coronavirus nsp10 and nsp16.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/France/Analysis/RBID.i   -Sk "pubmed:20699222" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/France/Analysis/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021